YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE17637
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYNSNYLMY FCLVLGIFAN IYVIIKITLG SSHILEYFQK NSNLSPKCEI NNSQKSQPNY  60
   61 EKTLQLMLFA FPSGGLGNKL FEIISLHGIA TSLQRKAVIN ATNPSFIETL NRNIQPLFPK 120
  121 LADQFTLRII PDSLVTHQQT NWGRCCVYDD PSRFLNRSDQ NLILDGHYFQ SFKYFHHIRP 180
  181 QVREWLAPSK LQAMRAEILL PAKFRDDFLI CTHVRRGDFQ YDGLHRPSDA TFTRAATDFL 240
  241 VDLYRKSHER VNVVVLGNDI HFAYTVFEDR VAHFTFLQKP VNNSYDYSLP QISPSYTAIL 300
  301 TPTLTPEIDL AFSRLFCDVT LITAPSSTFG WWLSYLAKRT ATTYYRDILE SKDGVAGEMH 360
  361 PEDFYPPEWI KLKTDLNGKI SKY

Type	Start	End	Confidence
Cytoplasmic	1	6	0.90
Transmembrane Helix	7	29	0.89
Non-Cytoplasmic	30	383	0.90