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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE18886
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHASMVISA CAFNRSIATH ILYIVPEIMC SLSGILSVAI IVYSFFLYGF RLLFHYNAKI  60
   61 LMILLTIFIL IFSLDIVYVC TRQIYLAFSY ENDCDLVFET ASCSIFRRIA LTCFVGVTTT 120
  121 QFCQMFERLI ATVAKEKYEF QTQWLGGLLV FFSILSAILA IEWTLWNEDP LEPMTHCLKM 180
  181 EPGSGSPLSA RAKFQFEGSN NDELSFDKDD IITITQQQEG GWWEGTHEGV TGWFPCAYVT 240
  241 LITEKDKLQR SRSVPNATAK EVVSVGAQPD YRDLVLKSYI ESEKEYMQSL LKTLQSLLIP 300
  301 IGASKILTAP EYCTLVGNFE VIYTLKRDLF EQLEREQNEE LPKMRVGGMF MNAALELRTA 360
  361 LMSYADNHPD AVEVLKKKQK ELEKVVKSQD REYKELVLGL SEPLRHVERY YNLLQELERI 420
  421 VPANHPDRGD LQRGSAVFRE TKDLCETLRK QKEAQLDFLF VSKVDKVVSA SERGSILYVG 480
  481 VANVEYKKAD AVDRFVALFT KYIMFFEVTK DMTYDIKEKF TVSGFIVRKK EATEISFDRP 540
  541 NTGEFTLTMV STGGEVERFL VALAKAENVA IITPTTTILR RPSKNANDTM NQSQTQGAET 600
  601 PLVAKPPLHP PGNSDQQYSM MNKRKSSKNF DDSLNLGNMK FDHELGMVLP EGFELPTSSR 660
  661 NSRNTADNLQ FSQFPSFFLS GNAGKRGDRN IRLRKDAARD EEIEFETLRI LEGYCVETGG 720
  721 GQSDFHANES YQQPHLIVAE DEKILMEEMI GDEVVLQEKS IVDAVYAIKD QLSFLQTEFQ 780
  781 KLAKVVESEQ KARRRLEHNL PKMSGVISPD GSSSTPRKEI NSFDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle