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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE23293
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGREQVMETN NFHVASFFSM IQIYSFFLGF TTESNLCGIC LTIRKHLETR NAIISKFNLE  60
   61 STMSDLSDEE DKPDSVNEIQ KGVSGIKISS DTDDRSQKKT NVDKVAPPHS STKQFGTNQN 120
  121 KTSKSDQNKT SKRKSSAHTD EKESENREEW SRRSRRKCGE ESDNEIESDN GEASDNGEES 180
  181 DNGEESDNEE ASDNGEASDN GEESDNEEAS DNGEESDNGE ERGNGEASDN GDESDNGEAS 240
  241 DNGEESDNEE ASDNGEESDN GEESDNGEER GNGEASDNGD ESDNGEASDN GEESDNEEAS 300
  301 DNGEESDNGE ASDNGEESDN EEASDNGEES DNGEASDNGE ESDNGEERDN GEASDNGEES 360
  361 ENGEEIGLKF SVLLANVRSC KKLEKASQLC AKLHSNDYQI IAVTESWLQE SVSSALFTSF 420
  421 GISIHRCDRD VALHTKNSGG GVAILFKPPL VVTKLDIQQE HHYNGHQSEV LACRVLNPDY 480
  481 PGASFNLVVV YRPPINGKIS QLIAHLSSFL PSSEYVLMGD FNFKEMYEKG SYSVNSKHEF 540
  541 MKFVISSKMT QHVCKATHNN NILDLVLSSP GIVLENVKVQ DCCVKSDHKS VSFSVTPKNK 600
  601 PGSNESTACI RSLIHTETFT LNFSQCDFKI LDRCISSQNW EYILSTRKTD RVCYEKFITV 660
  661 FVDLVKVFTQ KNTQIQNKES VQSFRRNNFE ELGMIPKYDK NLNNEKHNIL DLMIDDKLIS 720
  721 RNSGKASCFA SIFSSKFKDQ NSTQIPENTD NKTINASQIF EQSMVKQALE HVTPRFHFDK 780
  781 TNILVLNNCA NSLAAPLSRI LRNIFETEDY PESWNHCIVI PDPPKIRELI RDPKNYALNY 840
  841 YFDPFLGVME KVICDFLQKE NEHKFSPRTK DPTHCKYEEY VEAHKRVDLI HFKLSTAFDK 900
  901 VPHEFLISKL NDFNVHPTLR NWFRKLMSPK TFSVQVNDHL ESEKHNCQIG APRGSESRQF 960
  961 MFLVFINSLL CEIPINISCS ACAISEDLEI YSHEPIMIEK SLRKIEDWST SNKLTIDSND1020
 1021 IVRSVYIVFF VCSHFPQIEN FV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle