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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ugt-52
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLFFQIFFT PMTSPIRCLV FLFTLPRVIQ TLHVLFYILL LGKSHIDFTD SLIESLVENG  60
   61 HTVDLIIARM NSHVKSNGTN MVTRKYTYGF QEESPWNKAP HLLNPFKGRE RTWNEHTYYM 120
  121 DIVTDLCEIG LSDAGLHAFI SSQKYDIGIA TEYENCGVAL MKYYKIPSIV SVSSLPILDR 180
  181 QSLAAGMPNS PAVTQAIFEA EDLTTYWGKF RNFLNWAHIT LIINPYCEKH QSEVIKKHLG 240
  241 ENFDTSNLIE SLDLAFVNSN ELIETPRVSS HKIKYIGGIN LKKSKDRLDE EVEKVITQKP 300
  301 IGNGIVVFCF GTQVPSSLFP IEVRRAFAQA FRHFPDFTFV WKYEMQDGDE QIFANTTNLR 360
  361 LLKWLPQTDL LNDARTKAFI SHVGLNSYLE SSYAGVPILA VPLFADQPHN AFSGMSIGTT 420
  421 YMLDKTRLTT PNIVKGLEAV LYDSSYTLNA KRISKMLHER PNPPKKIFVE WIEFASRNPL 480
  481 LHRNLNLIGQ NMSVFEYYCL DIISFCILLL SIVISVFYLG TGWVSRMGRR VFGILKKRKV 540
  541 E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle