YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24874
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVKVVLFGL LGVSIHFIFN TLLTLDINKR VYNHRPGECR KIEGPVHGSE DIEVIDKLQI  60
   61 AFISSGLVYL PNSASDVKWK GQIFLYDLTK RSYKAEPIPV LNLEDVDGFH PHGLSHWILN 120
  121 NRTVRLFVVV HSKTFKHSIV ILDYNSAKRE LNHVKTIRGE KFVRPNDIVA TGENSFLVSN 180
  181 DGGAQTALGN VWEILSGFYK GGLVYYNGKK SQFLMENNIA NGIILSRDQK TLFVSHINQE 240
  241 TIGVYTWNQK DGEIQKISEI ETLTGCDNFY VDTQDHLWAG CHPVVKDAAG HLGNVSDSTL 300
  301 YGPSQVLRVS FSKDLKTAEI VEVLADDGRF VSASTIAIPF DDGKQMIVGT VARPAIHCDI 360
  361 NVSLNLY

Type	Start	End	Confidence
Signal Peptide	1	20	0.51
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	367	0.91