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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: egl-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVGKRGLVA PQNTFLENVI RRCNNADTSF ILANAQVVDY PIVYCNDGFS KLVGYTRAEI  60
   61 MQKPCSLAFM HGEHGEVGSL QKMQEALENA RTEQAEIGLC KKNKTPIWLL VHLAPIKNHK 120
  121 DAVVLYLCQF KDITPLKQPL DDENNKGLSR ILQIARIAKS KQQFNQIETK DLHKSPGNTS 180
  181 SNFNQVMNLG GDMLPQYRQE TPKTSPHIIL HYSSFKTIWD WSILALTFYT AFMVPFNIAF 240
  241 KNSLRPFYLI SSRENPGGGI DSVALMDSIV DVIFFADILL NFHTTFVGPG GEVVIEPSVI 300
  301 RQNYFKSWFL IDLLSCLPYD IFYMFKRDDE RIGSLFSALK VVRLLRLGRV ARKLDNYLEY 360
  361 GAATLLLLLC AYVIVAHWLA CVWFWIGDSE VRLKMDNLAL PDGWLWKLSN DLRQHYNIPL 420
  421 SNKTTLVGGP SRTSAYISSL YYTMSCMSTV GFGNIASNTD NEKIFGVCMM IISALLYAAI 480
  481 FGHMTTIIQQ MTSSTVRYHE MISNVREFIK LQEIPKELAE RVMDYVVSTW AMTKGIDTAK 540
  541 VLGYCPKDMK ADICVHLNRK VFNEHSCFRL ASDGCLRSLA MFLELNHAAP GDLLYHTGES 600
  601 VDALWFVVSG SLEVIQDDEV VAILGKGDVF GDEFWKANGS TGQSAANVRA LTYSDLHMIK 660
  661 KDKLMDVLDF YKAFANSFAR NMTLTYNLTH RMKFRKVADV KREKELDAKR KNEKLTLPND 720
  721 HPIRKLLFRM RERHGPRIFP SPMFADIEKG LKKSTEISRI SSLHSMIDET GGGGSSYVKS 780
  781 PRSKPKRPPL MKRQTVDEDA LSRTSWGMDK KDREWSSLSN IKTEMKSKFD IIGERLTIIE 840
  841 QINSRLALLE RVLIGNNGGA NTPSTMPVGS FSALNESGNR LTLDAAPVAR SVSWSEQHQP 900
  901 HWQRTSTVPP LRELEAGEWE PPIREPTPNP STSSSRVPHI QIDEDGEARP PTRTRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle