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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPI2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAQIILSEG FEVVPPPEMN DLVLFGSNQS VSSCDVSTVT TEDGTVFSGD SSPGGATEED  60
   61 FPEEKPFSFY FVKQPAYDDP EIKAKIDEAG HEINRYNKDR IVVSNAQESE KAEILSLFGQ 120
  121 MKSLVSKSEG YRVVIEEKKM EFDALHESLR NLRCSTSDQL CFSKEELDHL IYIAHYQIEH 180
  181 GSIGFEEEDW VLKETEKADG IVLSEDSLAE KEASINRVKS MAVELNEVKK ELDAITWKIN 240
  241 HLSDKVGKSQ NNLRVLDVKK AHILEERDRS YERIKMLRIQ RDKGKAAFYQ SLPVMRKARE 300
  301 LAASGNVRDL EVFASSEADR FMTQWNDDKA FRDDYVKRIS PSLCERQLNQ DGRIKDPEVQ 360
  361 VVWEKKVPVK GGEKVHETNR EDSSSNSSQY GSVITDKRKK ETRKKAMDFN RSSAEESDVT 420
  421 DLEFSVYEKP KKEEEEVDEE TLKEREREEQ LEKARLAMER KRKLQEKAAA KAAIRAQKEA 480
  481 EKKLKECEKK AKKKAAANSS SPSESDHSQE VTKDLEKVRT LAVSGKEKHQ KERSLFPKQR 540
  541 SFRYKHRGRG TEALPKAILN RRKAHKYWVW GLSSAALAVA LFLVVLLLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle