YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ugt-26
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRMSVVSIS LVLCTLSLVS SLNILVHSPA YAASHTNFMA RLADTLTEAG HNVTFLVPIA  60
   61 LEERRDKLGV KLTKDVIIVE QDEEMKSKLV PHSGSIEFLW IIEMDSSSID AMFSWYNEIM 120
  121 ILTCENFMRN KQVMSELKSR HFDVAIAEPF TICGLGLFEE LNIKKTILVS SCAHYDFMLP 180
  181 HIGEPEDFSS VPTLSSKVGE EMSMTEKWEN YRLVAETKAS LAKLFDAETR IYRESFGSDI 240
  241 PDWKELMSSA SLYFTNSNPF IDYPRASIQK TISIGGITVD FQQIKSEKLN KEWEEVLNKR 300
  301 QKSMLISFGS NVPSDKMPAA WKAGIFETIK SMPNVTFIWK YESDDVSFAD GISNIHFSKW 360
  361 VPQTALLNDP RLSAFLTHGG LGSTNELAYC AKPAVMVPIY GDQTRNANML ARHGSVIVLH 420
  421 KKELANVQRV KKAVHDILYN KQYTESAERI AEMIKNQPKT PKETVVRYTE FVAKYGPFPQ 480
  481 MAPHGRKLTY FQKTFLDIYS LFALGVVSVL TVAFLVIRYV LSCFKLKKD

Type	Start	End	Confidence
Signal Peptide	1	32	0.96
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	497	0.99
Transmembrane Helix	498	521	0.90
Cytoplasmic	522	529	0.95