YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ugt-32
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLFKLMIL YSVFSNTDSL RVLVYSPAYA ASHTNFMARL ADTLTEAGHN VTFFTPIIDE  60
   61 SRKDQFGVKL TKDVLILEQD EQVKRNPVTI DNDMKYFWTT DVTSANGHKV MGTLHKQAIF 120
  121 TCENVFKHQE LIDELRSRNY DIGLAEPLMT CGLALFRHIG IEKVMLTTSC TNYDILLPAT 180
  181 GEPEDTSYNP SMNSQVTDVM SFWQRLENYD LYHVMIPTFE TIFDDEANVY RKYLGESFPD 240
  241 WRDLIPDASL HFTNSIPFLD FPRPSIQKTI EIGGIAVDIE SIPPVNEEFS NILDKRPMNM 300
  301 LISFGSLARS TEMPIIFKEN LLRVFQSEPN CTFIWKYESD DVAFANDVEN VIFVKWMPQT 360
  361 AILKDNRLTA FLTHGGLGST NEAAFLGKPS VMFPIFADQS RNSNMLGRQE MSIVLHKSDL 420
  421 GNFQKIRDAF HEILHNEKYH LNARKVADMV RNQPAKPRDI FVKHVEFVGR FGPLHHMTPY 480
  481 SLKMPFYQRY HYDIFIFKFL TNYFIPVVFL LCVTKLIFSK FQLKKIK

Type	Start	End	Confidence
Non-Cytoplasmic	1	498	0.96
Transmembrane Helix	499	518	0.83
Cytoplasmic	519	527	0.82