YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	dhs-25
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALLGGRIA VVTGGASGIG KAISQTLAKH GARVVVADLD SGNAAATAKA LPASQSHSSF  60
   61 ACDVSNADSV KGLSEHVKSL GTPSILVNCA GITKDSTLLK MKQEQWDSVI KVNLTGVFHV 120
  121 SQAFVKASVD NNNHPLSIIN VSSIVGKMGN FGQTNYAATK AGVIGFTKSA AKELAKKNVR 180
  181 VNAVLPGFIK TPMTEAMPPT VLAEICKGIP MGRMGEAEEI ANSVLYLASD LSSYVTGATL 240
  241 EVTGGFSM

Type	Start	End	Confidence
Signal Peptide	1	18	0.60
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	248	0.97