YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	dsl-7
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTLWSLLLY TFIPLIQCTG YLELRLTSPY VRVLNVSVEL AIGSEKSFYK VPLSPYYELA  60
   61 ITNVPIEFDQ PASIIIRSGP VKEIGLTDFV VSPKIFSTRK MSIVPPKAGL PFSGFRIDIK 120
  121 CDTNYFGAHC EHFCDEEQAR SMGRRCNILG NIGCPIGVRG SKCDIELPID SGICKCMNGG 180
  181 KCVNSFDSKL TADFPICECL NGFEGAACEK QMKIFEPKIS TRLFESTARF HDLANVSVKN 240
  241 QLYDDKMDIY SKHVAPSFHV LQQGALNGKA LRAPKKQKNT IIFDPVTLSF HPTKPISTPY 300
  301 FPKGRPVRLN SQS

Type	Start	End	Confidence
Signal Peptide	1	20	0.88
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	313	0.99