YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	fbxa-145
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNCSGTAKV ELLESFENWN KLPPEIKLEC MKHLDFKTRF IMRSVSRTER ILVDSHNFKL  60
   61 DSVRIEGLLP YPMNTIIQSS FDTQKITIKS GNHEQCVVHM RNRLRFNETI VPLLVFILKN 120
  121 ATINDFSIET ILNIDWSKVL QDALNSKSLS IRSFSGVLLK FQEAFFFVNK LNYTSKSIYL 180
  181 DGHGCKNFPI DQLISIESVS NASLLQIRDV QSKDIIWKIA NKWIETDAAI GTRFQLTSMS 240
  241 KEIITQFSSH FKNRIISASD VEILIRTDNP MKHILLKLAR TWRVARPFTC IVISAETEQS 300
  301 EFVNFGMWVS KKVIPLWEYI SLFLADEFND DDGLNLSSFL ILLLHCIWLI FSMLFKRTFY 360
  361 GQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	335	0.80
Transmembrane Helix	336	355	0.82
Cytoplasmic	356	362	0.60