YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE35395
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLQFLLVFA LIQPSYQQFD ASQCQISKGC HIPESTQSNG MGVAWSLLDD ETLLLELFVN  60
   61 SDEEKGRYVA VGFSNDEHMG NEPVIECSAI GNQKPSMKFS FDKTNGKGNE RIAGDYTAHF 120
  121 SNNTAVFENG VLYCKSNVKV SGSSENSNVF KFDPSTQYHL LLANGKTTAK GLGYHKDQSS 180
  181 VSRKLRLSES SPGFDQSECG KTKGCTMPAA NSCYNVDGNI GASYQVISDN QIAFEIFGPA 240
  241 NTTVNENVYV ALGFSDDEKM ANISVIECSN LPSETAPTMK FSYNPGFKNA RIDGEPPIRA 300
  301 KFIQQSIGRI SDGSIYCKGV VNVGGEAENP QIFKWNKNQG YHLMFAAGFS ADTGLTQHWG 360
  361 SCVSILTFLD QVNNLGFNDA TCGLTKGCFT PTDCTDGCDD IRSSWSLLSD NQIHVELTGK 420
  421 VNATNKYVAM GFSTNGTMGN TSVIECSSFD NSNFSMTFSY NLVNAPDYSN LRSTSDVSGL 480
  481 FTNRRVQFVD GVLYCSADVA VVGDANDQTV FKYDPATKYS IIMATGDTST KGNVKGLGYH 540
  541 KKKRSVAPLQ LLSDYTPPTA APPPSGKGTF DSSTCGKDKA CYTPPNNVDT VAYKVLNDSY 600
  601 IEFEISSTQS SSSGVYTALG FSNDGKMNPA NVIECSSLGS QPLSMKFSTN SGYSNDRISG 660
  661 EEAIRSQYIT NTETSYVDGK IYCKGTVRSD GNSNAAIFKY TPKQQYHLII AKGTASPGGL 720
  721 GYHGTNRYIS TARLLTDLGA GNESGSSNTL LILHAMFMTI AWMTMVPIAV IFARVLRSSW 780
  781 PTTKPGGLLI WFHIHRGANL IGIALMIAAF VLILIHKDWK FTTIGWGGKH AIIGIIALCL 840
  841 AWLQPFISTL RCSPNDSRRP IFNYIHRGIG VTAMVLATTA ICIAGYHFTG GRHVVQLVLA 900
  901 LIPISVIFAL SLFFIIFNNV VDVDTKSFTK TNGASARTED IPMRPTSKTE SETTWAIQSP 960
  961 PTSTDSNREV PAEKKRLWVN RFREFVVYGA VLIFIAVGTI LSVFFGTGFS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle