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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tht1
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYSNVAFSE GLAGFDSLAH VYQALLKKST CYQEVAATLI SKCSLLNTEL TIDNRIHSAI  60
   61 QMTLCDFERS QILAPSECVR GSQSECVSKL ESTSTWWLSF TSHFHDVNHL CRLANLEMQK 120
  121 ELSIEVNMNV TLVQKQFLEM VILHLRNFES VTDKMNQRID KFDGKFNSVI ENSFKDINFR 180
  181 VNQEIMGLVE LQNHQQEGMV QQKEILSTIK QLKSEIFDIN SFFANFIEES AGYSNSLIEK 240
  241 LNEKFTSENA IALSAIGKYT SEFSAFMEKR IKNLITTTED SLQQSVQSNI DFVNSGFQPL 300
  301 YDLTIQLKEE LQSLKRLSSE QQNLQHEQIL QWKSDFLNVS KDHLKVLQQL RPLIDIVEKF 360
  361 MNVYFKGLSN IISSFAFIGF TLFATLSSLF FKVLKIHRRP IIVFGSLSII FIHIYCFKIT 420
  421 SWVNLYGWIT CTIARTLSFI KLNIRTFYLT AFLCALLNFL RYLKYRNSKK DTELSLFLPA 480
  481 PEECNIYHNE HIQVQEDNYL CPIENSLIDL FGSENNKEKL GKQENVRFAF LNSESLEQSP 540
  541 WWD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle