YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MRPE_BACSU
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQILLNVF LAFGWMFLSN SPSAAGFITG YILGMLSLFV FRRFFTRQFH LWKLISIIKL  60
   61 CFIFIKELYL ANVSVMKSVL SPKLNIRPGI FGFKTELTKD WEITMLSLLI TLTPGTLVMD 120
  121 ISDDRTILYI HAMDIEDAEK AIFDIRESFE KAIQEVSR

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.67
Transmembrane Helix	21	41	0.83
Cytoplasmic	42	54	0.58
Transmembrane Helix	55	70	0.52
Non-Cytoplasmic	71	158	0.46