YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CWLO_BACSU
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSLITLGL ASVIGTSSFL IPFTSKTASA ETLDEKKQKI ESKQSEVASS IEAKEKELTE  60
   61 LQENQSKIEK ELKDINDKAL DTSNKIEDKK EENDKTKEEI KKLKKEIKET EARIEKRNEI 120
  121 LKKRVRSLQE SGGSQGYIDV LLGSTSFGDF ISRATAVSSI VDADKDLIKQ QEQDKAKLED 180
  181 SEADLNDKLK EVQAALAKLE TMQKDLDKQL NEKDKLFDEA KASQKKTAKA ISELKSEASE 240
  241 LANQKANTEA EQARIKKEQE AAAALIKKQE EAQKASDETQ TDDSQTATTE SSKASSSDDS 300
  301 SDNSSDNSSN GSSNSSSNGS SSKKSSGSNS NSGGTVISNS GGIEGAISVG SSIVGQSPYK 360
  361 FGGGRTQSDI NNRIFDCSSF VRWAYASAGV NLGPVGGTTT DTLVGRGQAV SASEMKRGDL 420
  421 VFFDTYKTNG HVGIYLGNGT FLNDNTSHGV SVDSMSNPYW KAAFKGVVRR VVQ

Type	Start	End	Confidence
Signal Peptide	1	30	0.92
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	473	0.99