YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148508605
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMVGTALSIL IRAELGQPGA LLGDDQIYNV IVTAHAFVMI FFMVMPMMIG GFGNWLVPLM  60
   61 IGAPDMAFPR MNNMSFWLLP PSFLLLLASS MVEAGAGTGW TVYPPLAGNL AHAGASVDLT 120
  121 IFSLHLAGVS SILGAINFIT TIINMKPPAM TQYQTPLFVW SVLITAVLLL LSLPVLAAGI 180
  181 TMLLTDRNLN TTFFDPAG

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.81
Transmembrane Helix	34	57	0.88
Cytoplasmic	58	75	0.77
Transmembrane Helix	76	97	0.90
Non-Cytoplasmic	98	120	0.76
Transmembrane Helix	121	143	0.90
Cytoplasmic	144	156	0.83
Transmembrane Helix	157	181	0.90
Non-Cytoplasmic	182	198	0.83