YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148508737
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQPGALLGDD QIYNVIVTAH AFVMIFFMVM PMMIGGFGNW LVPLMIGAPD MAFPRMNNMS  60
   61 FWLLPPSFLL LLASSMVEAG AGTGWTVYPP LAGNLAHAGA SVDLTIFSLH LAGVSSILGA 120
  121 INFITTIINM KPPAMTQYQT PLFVWSVLIT AVLLLLSLPV LAAGITMLLT DRNLNTTFFD 180
  181 PAGGGDPILY QHL

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.83
Transmembrane Helix	19	42	0.90
Cytoplasmic	43	60	0.80
Transmembrane Helix	61	82	0.91
Non-Cytoplasmic	83	105	0.78
Transmembrane Helix	106	128	0.90
Cytoplasmic	129	141	0.83
Transmembrane Helix	142	165	0.90
Non-Cytoplasmic	166	193	0.84