YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BCCP1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSFSVTS PAAAASVYAV TQTSSHFPIQ NRSRRVSFRL SAKPKLRFLS KPSRSSYPVV  60
   61 KAQSNKVSTG ASSNAAKVDG PSSAEGKEKN SLKESSASSP ELATEESISE FLTQVTTLVK 120
  121 LVDSRDIVEL QLKQLDCELV IRKKEALPQP QAPASYVMMQ QPNQPSYAQQ MAPPAAPAAA 180
  181 APAPSTPASL PPPSPPTPAK SSLPTVKSPM AGTFYRSPAP GEPPFIKVGD KVQKGQVLCI 240
  241 VEAMKLMNEI ESDHTGTVVD IVAEDGKPVS LDTPLFVVQP

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	280	0.99