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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DRL45_ARATH, DRL...
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN  60
   61 CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC IIPDRRRYAL GIGGLSNRIS 120
  121 KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE 180
  181 ANVQVVSITG MGGLGKTTLA KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP 240
  241 KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS 300
  301 RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC 360
  361 GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN FNDDNNNTCN YVLSLSFEEL 420
  421 PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN 480
  481 MVISERDVKT SRFETCHLHD MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ 540
  541 YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG 600
  601 KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL 660
  661 RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR GMVRLRTLTI ELRKETSLET 720
  721 LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT 780
  781 TLYLQHCRLE EDPMPILEKL HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE 840
  841 DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK 900
  901 ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK 960
  961 KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN CPKLKQLPDG LRFIYSLKNL1020
 1021 TVPKRWKKRL SKGGEDYYKV QHIPSVEFY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle