YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FLA8_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASQTFSLL AFTFSLLAFA STVSSHNITQ ILADSPDYSS FNSYLSQTKL ADEINSRTTI  60
   61 TVLVLNNGAM SALAGKHPLS VIKSALSLLV LLDYYDPQKL HKISKGTTLS TTLYQTTGNA 120
  121 PGNLGFVNIT DLKGGKVGFG SAASGSKLDS SYTKSVKQIP YNISILEIDA PIIAPGVLTA 180
  181 PAPSASLSNI TGLLEKAGCK TFANLLVSSG VLKTYESAVE KGLTVFAPSD EAFKAEGVPD 240
  241 LTKLTQAEVV SLLEYHALAE YKPKGSLKTN KNNISTLATN GAGKFDLTTS TSGDEVILHT 300
  301 GVAPSRLADT VLDATPVVIF TVDNVLLPAE LFGKSKSPSP APAPEPVTAP TPSPADAPSP 360
  361 TAASPPAPPT DESPESAPSD SPTGSANSKS ANAAVGVSTP SLFTALVTIA AIAVSVSLCS 420
  421

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	420	0.96