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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSH5_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTSSNPLL LSSNFLGSQI IISAPTPKTT TKSLPFSVIS RKRYQISQSE KLMKSLPSQA  60
   61 ALAALLFSSS SPQALAVNEP VQPPAPTITA EAQSPNLSTF GQNVLMTAPN PQAQSSDLPD 120
  121 GTQWRYSEFL NAVKKGKVER VKFSKDGSVL QLTAVDNRRA TVIVPNDPDL IDILAMNGVD 180
  181 ISVSEGEGGN GLFDFIGNLL FPLLAFGGLF YLFRGGQGGA GGPGGLGGPM DFGRSKSKFQ 240
  241 EVPETGVTFG DVAGADQAKL ELQEVVDFLK NPDKYTALGA KIPKGCLLVG PPGTGKTLLA 300
  301 RAVAGEAGVP FFSCAASEFV ELFVGVGASR VRDLFEKAKS KAPCIVFIDE IDAVGRQRGA 360
  361 GMGGGNDERE QTINQLLTEM DGFSGNSGVI VLAATNRPDV LDSALLRPGR FDRQVTVDRP 420
  421 DVAGRVQILK VHSRGKAIGK DVDYEKVARR TPGFTGADLQ NLMNEAAILA ARRELKEISK 480
  481 DEISDALERI IAGPEKKNAV VSEEKKRLVA YHEAGHALVG ALMPEYDPVA KISIIPRGQA 540
  541 GGLTFFAPSE ERLESGLYSR SYLENQMAVA LGGRVAEEVI FGDENVTTGA SNDFMQVSRV 600
  601 ARQMVERFGF SKKIGQVAVG GAGGNPFLGQ SMSSQKDYSM ATADVVDAEV RELVEKAYVR 660
  661 AKEIITTQID ILHKLAQLLI EKETVDGEEF MSLFIDGQAE LYVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle