YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLS2_ARATH, GLTB...
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQSPGATG ASSSVSRLLS SAKLSSTKTI FSVDFVRSYC ISKGTKRRNE LSGFRGYSPL  60
   61 LKSSLRSPFS VKAILNSDRA AGDASPSFSD LKPQVAYLED IISERGACGV GFIANLENKA 120
  121 THKIVNDALI ALGCMEHRGG CGSDNTSGDG SGLMTSIPWD LFNEWAEKQG IASFDRTHTG 180
  181 VGMLFLPRDD NIRKEAKKVI TSIFEKEGLE VLGWRDVPVE ASIVGHNAKQ TMPNTEQVFV 240
  241 RIVKDDKVDD VERELYICRK LIERAVASES WASELYFSSL SNQTIVYKGM LRSEVLGLFY 300
  301 PDLQNDLYKS PFAIYHRRFS TNTSPRWHLA QPMRFLGHNG EINTIQGNLN WMTSREASLR 360
  361 SPVWHGREND IRPISNPKAS DSANLDSAAE LLIRSGRTPE ESLMILVPEA YKNHPTLMIK 420
  421 YPEAVDFYDY YKGQMEPWDG PALVLFSDGK TVGACLDRNG LRPARYWRTS DNVVYVASEV 480
  481 GVLPMDESKV TMKGRLGPGM MISVDLENGQ VYENTEVKKR VASYNPYGKW VSENLRNLKP 540
  541 SNYLSSAILE TDETLRRQQA FGYSSEDVQM VIESMAAQGK EPTFCMGDDT PVAVLSQKPH 600
  601 MLYDYFKQRF AQVTNPAIDP LREGLVMSLE VNIGKRGNIL EVGPQNVSQV VLSGPVLNER 660
  661 ELEGLLGDPL LKSQILPTFF DIRRGIEGSL KKGLLKLCEA ADEAVRNGSQ VLVLSDRSDN 720
  721 PEPTRPAIPM LLAVGAVHQH LIQNGLRMSA SIIADTAQCF STHHFACLIG YGASAICPHL 780
  781 ALETCRQWRL SNKTVNMMRN GKMPTVTMEQ AQKNYRKAVN TGLLKVLSKM GISLFSSYCG 840
  841 AQIFEIYGLG NEVVEFSFRG SASQIGGLTL DELARETLTF WVRAFSEDTA KRLENFGFIQ 900
  901 FRPGGEYHGN NPEMSKLLHK AVREKSETAY AVYQQHLANR PITVFRDLLE FKSDRNPIPV 960
  961 GKVEPASSIV ERFCTGGMSL GAISRETHET IAIAMNRLGG KSNSGEGGED PIRWKPLTDV1020
 1021 VDGYSSTLPH LKGLRNGDTA TSAIKQVASG RFGVTPTFLV NADQLEIKVA QGAKPGEGGQ1080
 1081 LPGKKVSAYI ARLRNSKPGV PLISPPPHHD IYSIEDLAQL IFDLHQVNPK AKVSVKLVSE1140
 1141 TGIGTVASGV AKANADIIQI SGYDGGTGAS PISSIKHAGG PWELGLAETQ KTLIGNGLRE1200
 1201 RVIIRVDGGF KSGVDVLIAA AMGADEYGFG TLAMIATGCI MARICHTNNC PVGVASQREE1260
 1261 LRARFPGLPG DLVNFFLYIA EEVRGILAQL GYEKLDDIIG RTDLLKARDI SLVKTHLDLS1320
 1321 YLLSSVGLPK RSSTSIRKQE VHSNGPVLDD TLLQDPEIMD AIENEKTVHK TMSIYNVDRS1380
 1381 VCGRIAGVIA KKYGDTGFAG QLNLTFTGSA GQSFACFLTP GMNIRLVGEA NDYVGKGMAG1440
 1441 GEVVILPVES TGFRPEDATI VGNTCLYGAT GGLLFVRGKA GERFAVRNSL AQAVVEGTGD1500
 1501 HCCEYMTGGC VVILGKVGRN VAAGMTGGLA YILDEDNTLL PKMNKEIVKI QRVTSPVGQT1560
 1561 QLKSLIQAHV EKTGSSKGAM IVEEWDKYLA MFWQLVPPSE EDTPEANSDH ILKTTTGDEE1620
 1621 QVSSTLAEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle