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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HIPL2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTNQAITI CSLLLLLLLS ETTSHLLCSD SKTPVNNNET LQFCDSYKER SCCNSKDDLQ  60
   61 LQNRFNSMNI SDSNCSSLLK SILCSKCDEF SGQLFGDDDS SLVPILCNST SQDLCSKLWD 120
  121 SCQNISIVSS PFSPTLLGGA TSPSTSSNSS TLTDLWKSQT EFCTAFGGPS QTNNNKTKCF 180
  181 NGEPVNRDTS DDDEDDVKTP KGICLEKIGT GSYLNMVAHP DGSNRAFFSN QPGKIWLGTI 240
  241 PDQDSGKPME IDESTPFVDI TDQVSFDTQF GMMGMAFHPK FAENGRFFAS FNCDKVKSPG 300
  301 CSGRCACNSD VNCDPSKLPK DDGTTPCRYQ TVVSEYTANG TSSSPSTAKI GKASEVRRIF 360
  361 TMGLPYSSSH GGQILFGPDG YLYLMTGDGG GVSDTHNFAQ NKKSLLGKIL RLDVDVMPSV 420
  421 SEISKLGLWG NYSIPKNNPF QGNENEQPEI WALGLRNPWR CSFDSERPDY FLCADVGKDT 480
  481 YEEVDIITMG GNYGWRTYEG PYVFSPLSPF GENVSSDSNL TFPILGYNHS EVNKHEGSAS 540
  541 IIGGYFYRSN TDPCSYGTYL YADLYANAMW AAIESPEDSG NFTDSLIPFS CSKDSPMKCT 600
  601 AAPGGASSGP ALGYIYSFGQ DNNKDIHLLT SSGVYRIVRP SRCNLACSKE NTTASAGKQN 660
  661 PAGSAPPQPL PSSARKLCFS VFLLLSLLMM FLTLLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle