YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15220525, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFIVGVVIG LLVGIAIIIG FVKLENSRSK LRSELLTWLN HHLTKIWPYV DEAASELIKA  60
   61 SVEPVLEQYR PAIVASLTFS KLTLGTVAPQ FTGVSVIDGD KNGITLELDM QWDGNPNIVL 120
  121 GVKTLVGVSL PIQVKNIGFT GVFRLIFRPL VEDFPCFGAV SVSLREKKKL DFTLKVVGGD 180
  181 ISAIPGLSEA IEVESYVFIL ELARQVGNLS RQLKFFCVSI PSDLELKPVG MLEVKLVQAK 240
  241 NLTNKDLVGK SDPFAKMFIR PLREKTKRSK TINNDLNPIW NEHFEFVVED ASTQHLVVRI 300
  301 YDDEGVQASE LIGCAQIRLC ELEPGKVKDV WLKLVKDLEI QRDTKNRGEV HLELLYIPYG 360
  361 SGNGIVNPFV TSSMTSLERV LKNDTTDEEN ASSRKRKDVI VRGVLSVTVI SAEEIPIQDL 420
  421 MGKADPYVVL SMKKSGAKSK TRVVNDSLNP VWNQTFDFVV EDGLHDMLVL EVWDHDTFGK 480
  481 DYIGRCILTL TRVIMEEEYK DWYPLDESKT GKLQLHLKWM AQSIYRDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle