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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9955529
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTLSLIQS NASNPKVWVV IGVTVAGIVI LAETRKRRIR ALREEDFGAF LDRFELLPFP  60
   61 PPPPPAAKQS LSGLTFSISD AFDVKDYITG FGCPQWKKTH EAAEKTAVVV TTLLKNGATC 120
  121 VGKTIMDELG FGIIGENKHY GTPINPLMPD NVPGGCSSGS AVSVGAELVD FSLGIDTTGG 180
  181 VRVPAAFCGI LGFRPSQGTV SSVGVLPNSQ SLETVGWFAS DPSVLCQVGH ALLNLSAVTH 240
  241 RRQRSLIFAD DLFELSDIPK QKSVQVVRKA IENLSGYKTP KHVNVGQYVA SNVPSLAEFC 300
  301 EQSGKSQNSA STLRALSSVM LAIQRHEFKT NHEEWWQTCK SFLGPRFSND VVTALKSKNE 360
  361 SIKSLYRVKN EMRATIQSLL KEDGILVIPT VADPPPRLNT KRNKSLNEFL DRTYALSCIA 420
  421 SMSGCCQVTI PLGEHGDRPI SVSLLTYYGG DKFLLDTTLD VYASLQDQAK LASNLAPVSD 480
  481 TNGNMEASEV MKEKGNAAYK GKQWNKAVNF YTEAIKLNGA NATYYCNRAA AFLELCCFQQ 540
  541 AEQDCTKAML IDKKNVKAYL RRGTARESLV RYKEAAAGYW SVTLWLIISA DFRHALVLEP 600
  601 QNKTAKVAEK RLRKHI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle