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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HPSE1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFRVCVIVV FLGCLLLVPE KTMAQEMKRA SIVIQGARRV CETDENFVCA TLDWWPHDKC  60
   61 NYDQCPWGYS SVINMDLTRP LLTKAIKAFK PLRIRIGGSL QDQVIYDVGN LKTPCRPFQK 120
  121 MNSGLFGFSK GCLHMKRWDE LNSFLTATGA VVTFGLNALR GRHKLRGKAW GGAWDHINTQ 180
  181 DFLNYTVSKG YVIDSWEFGN ELSGSGVGAS VSAELYGKDL IVLKDVINKV YKNSWLHKPI 240
  241 LVAPGGFYEQ QWYTKLLEIS GPSVVDVVTH HIYNLGSGND PALVKKIMDP SYLSQVSKTF 300
  301 KDVNQTIQEH GPWASPWVGE SGGAYNSGGR HVSDTFIDSF WYLDQLGMSA RHNTKVYCRQ 360
  361 TLVGGFYGLL EKGTFVPNPD YYSALLWHRL MGKGVLAVQT DGPPQLRVYA HCSKGRAGVT 420
  421 LLLINLSNQS DFTVSVSNGI NVVLNAESRK KKSLLDTLKR PFSWIGSKAS DGYLNREEYH 480
  481 LTPENGVLRS KTMVLNGKSL KPTATGDIPS LEPVLRSVNS PLNVLPLSMS FIVLPNFDAS 540
  541 ACS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle