YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4544368, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTCISFAFNA LCFCLFFIVV ASRSTVRPKV FNVQRHGAKP DGKTDNANAF TSIWSRACKR  60
   61 ISGSSKIYVP KGTFYLGGVE FVGPCKNPIE FIIDGTLLAP ANPSDIKQDT WINFRYINNL 120
  121 SISGSGTLDG QGKQSWPHND CHTNPNCPKL AMTMGFAFVN NSNIKDITSL NSKMGHFNFF 180
  181 SVHHFNITGV TITAPGDSPN TDGIKMGSCS NIQISDTNIG TGDDCIAILS GTTNLNISNV 240
  241 NCGPGHGISV GSLGKNKDEK DVKDLIVRDV IFNGTSDGIR IKNWESSASK ILVSNFVYEN 300
  301 IQMIDVGKPI NIDQKYCPHP PCEHERKGES HVQIQNLKLK NIYGTSKNKV AVNLQCSKIF 360
  361 PCKNVELIDI NIKQNGVKDG SSTSVCENVD GFARGKMFPP HCLN

Type	Start	End	Confidence
Signal Peptide	1	24	0.95
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	404	0.99