YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT33_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSFRSSILL VLLSLITVLN ATRARSETES KVHIVYLGEK KHHDPEFVTE SHHQMLASLL  60
   61 GSKKDADDSM VYSYRHGFSG FAAKLTKSQA KKIADLPEVV HVIPDGFHEL ATTRTWEYLG 120
  121 LSSANPKNLL NDTNMGDQVI IGVIDTGVWP ESESFNDNGV GPIPRKWKGG CESGENFRST 180
  181 DCNRKLIGAK YFINGFLAEN KGFNTTESRD YISARDFDGH GTHVASIAGG SFVPNVSYKG 240
  241 LAGGTLRGGA PRARIAMYKA CWFHEELKGV TCSDSDIMKA IDEAIHDGVD VLSISLVGQI 300
  301 PLNSETDIRD EFATGLFHAV AKGIVVVCAG GNDGPAAQTV VNIAPWILTV AATTLDRSFP 360
  361 TPITLGNNKV ILGQATYTGP ELGLTSLVYP ENARNNNETF SGVCESLNLN PNYTMAMKVV 420
  421 LCFTASRTNA AISRAASFVK AAGGLGLIIS RNPVYTLSPC NDDFPCVAVD YELGTDILSY 480
  481 IRSTRSPVVK IQRSRTLSGQ PVGTKVVNFS SRGPNSMSPA ILKPDIAAPG VRILAATSPN 540
  541 DTLNVGGFAM LSGTSMATPV ISGVIALLKA LHPEWSPAAF RSAIVTTAWR TDPFGEQIFA 600
  601 EGSSRKVSDP FDYGGGIVNP EKAAEPGLIY DMGPQDYILY LCSAGYNDSS ISQLVGQITV 660
  661 CSNPKPSVLD VNLPSITIPN LKDEVTLTRT VTNVGLVDSV YKVSVEPPLG VRVVVTPETL 720
  721 VFNSKTISVS FTVRVSTTHK INTGYYFGSL TWTDSVHNVV IPLSVRTQIL QNYYDEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle