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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8778983, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCLTITIMF FMFFFLSVIQ KCKSETSKSG DYIIYMGAAS SDGSTDNDHV ELLSSLLQRS  60
   61 GKTPMHRYKH GFSGFAAHLS EDEAHLIAKQ PGVLSVFPDQ MLQLHTTRSW DFLVQESYQR 120
  121 DTYFTEMNYE QESEMHEGDT IIGFLDSGIW PEAQSFNDRH MGPVPEKWKG TCMRGKKTQP 180
  181 DSFRCNRKLI GARYYNSSFF LDPDYETPRD FLGHGTHVAS IAAGQIIANA SYYGLASGIM 240
  241 RGGSPSSRIA MYRACSLLGC RGSSILAAFD DAIADGVDVI SISMGLWPDN LLEDPLSIGS 300
  301 FHAVERGITV VCSVGNSGPS SQSVFNAAPW MITVAASTID RGFESNILLG GDENRLIEGF 360
  361 GINIANIDKT QAYPLIHARS AKKIDANEEA ARNCAPDTLD QTIVKGKIVV CDSDLDNQVI 420
  421 QWKSDEVKRL GGIGMVLVDD ESMDLSFIDP SFLVTIIKPE DGIQIMSYIN STREPIATIM 480
  481 PTRSRTGHML APSIPSFSSR GPYLLTRSIL KPDIAAPGVN ILASWLVGDR NAAPEGKPPP 540
  541 LFNIESGTSM SCPHVSGIAA RLKSRYPSWS PAAIRSAIMT TAVQMTNTGS HITTETGEKA 600
  601 TPYDFGAGQV TIFGPSSPGL IYETNHMDYL NFLGYYGFTS DQIKKISNRI PQGFACPEQS 660
  661 NRGDISNINY PSISISNFNG KESRRVSRTV TNVASRLIGD EDTVYTVSID APEGLLVRVI 720
  721 PRRLHFRKIG DKLSYQVIFS STTTILKDDA FGSITWSNGM YNVRSPFVVT SKDDNDSER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle