YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13374879, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGRYCDQHN GYEERRMRMM MRRIAWACLG LIVAVAFVVF LVWAILHPHG PRFVLQDVTI  60
   61 NDFNVSQPNF LSSNLQVTVS SRNPNDKIGI FYDRLDIYVT YRNQEVTLAR LLPSTYQGHL 120
  121 EVTVWSPFLI GSAVPVAPYL SSALNEDLFA GLVLLNIKID GWVRWKVGSW VSGSYRLHVN 180
  181 CPAFITVTGK LTGTGPAIKY QLVQRCAVDV

Type	Start	End	Confidence
Cytoplasmic	1	23	0.99
Transmembrane Helix	24	46	0.95
Non-Cytoplasmic	47	210	0.83