YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7270511, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGACISFFSS SSPSKTAATT NNHSNGTEFS STTGATTNSS VGQQSQFSDI STGIISDSGK  60
   61 LLESPNLKVY NFLDLKTATK NFKPDSMLGQ GGFGKVYRGW VDATTLAPSR VGSGMIVAIK 120
  121 RLNSESVQGF AEWRSEVNFL GMLSHRNLVK LLGYCREDKE LLLVYEFMPK GSLESHLFRR 180
  181 NDPFPWDLRI KIVIGAARGL AFLHSLQREV IYRDFKASNI LLDSNYDAKL SDFGLAKLGP 240
  241 ADEKSHVTTR IMGTYGYAAP EYMATGHLYV KSDVFAFGVV LLEIMTGLTA HNTKRPRGQE 300
  301 SLVDWLRPEL SNKHRVKQIM DKGIKGQYTT KVATEMARIT LSCIEPDPKN RPHMKEVVEV 360
  361 LEHIQGLNVV PNRSSTKQAV ANSSRSSPHH YRYKAGALGA ERKRATPGRF GSVEK

Type	Start	End	Confidence
Signal Peptide	1	17	0.59
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	415	0.98