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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157823968, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLGPVLLQ VFWAGCVLTL QFPVPAAFTA NGTHLQHLAR DPTTGTLYVG ATNFLFQLSP  60
   61 GLQLEAVVST GPVNDSRDCL PPVIPDECPQ AQPTNNPNQL LLVSPEALVV CGSVHQGICE 120
  121 LRSLGQIRQL LLRPERPGDT QYVAANDPAV STVGLVAQGL AGEPLLFVGR GYTSRGVGGG 180
  181 IPPITTRALR PPDPQAAFSY EETAKLAVGR LSEYSHHFVS AFVRGTSAYF LFLRRDLKAP 240
  241 SRAFRAYVSR VCLQDQHYYS YVELPLACQG GRYGLIQAAA VATSKEAARG EILFAAFSSV 300
  301 APPTVDWPLS ASTGASGTSV LCAFPLDEVD QLANDTRDAC YTREGRAENG TKVADIAYDV 360
  361 LSDCAQLPVD TPDAFPCGSD HTPSPMVSCV PLEATPILEL PGVQLTAVAV TMEDGHTIAF 420
  421 LGDSQGQLHR VYLGPGRSAA PYSKQSIQPG SAVNRDLTFD GTFEHLYVAT QTTLVKVPVA 480
  481 PCAQHLDCDS CLAHRDPYCG WCVLLGRCSR RSECSRAQGP EQWLWSFQSE LGCLRVVAVS 540
  541 PANISRGERR EVFLSVPGLP SLWPEESYFC YFGDQQSPAL LTSSGVMCPS PDPSEAPVLQ 600
  601 RGADHISVNV ELRFGAVVIA NTSLSFYDCM AVTEFFPSAP CRACVSSRWG CNWCVWQQLC 660
  661 THKASCDSGP MVASQQSPLL PLIPPARDVL TPFPLTVPRA TATPTPNTFP AEPRAPSIAS 720
  721 DVLPGAKPSR LSLWGPWAGP GPILSPTSTE SPLHEKPLPP EPPTTPGTTV PAPADLGPLT 780
  781 TPEDLLASYP FPSDAAAVSP TEPGPETLPS MVALDQPPGT APATLFPGAT GSMKPVLDWL 840
  841 TKGGGELLEA EEWMGGDTPA FSTSTLLSGD GDSAEHEGPS APLILLSSLD YQYDTPGLWE 900
  901 LGEVNQRVSS CPCVENVQGS LLIPVHVKRE VQLRGRNLWL FQDGPRSSEC VLVLEGLEVA 960
  961 VEAQVECEPP PDTWCHIKCQ QHQFSYEASK PELQVGLFLR WAGGLRVDSA DGLHVVLYDC1020
 1021 SVGHGDCSRC QTAMPQYDCV WCEGEHPRCV AREACNEAET VATQCPAPLI HSVEPLTGPI1080
 1081 DGGTRVTIRG SNLGQHVQDV LGMVRVAGVP CAVDVGEYDV SSSLVCITGS SGEEVTGAVA1140
 1141 VEVPGRGHGV SEFSFAYQDP KVLSIFPVHG PRAGGTHLTL HGSKLLTGRL EDIRVVVGDQ1200
 1201 PCHLLLEQQS EQLHCETSPN PVPAELPVMV WFGATERRLQ HSQFKYTADP NITSVGPAKS1260
 1261 FFSGGREIWV RGQNLDVVQM PRIRVTVIPR VPQHGQGLGQ KHHVVPEKVC GPRAIVNQVP1320
 1321 HLTSSTDRRA MSRELLPPHH VPLACPPWPA PGPLGPGGVY P

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Created and Maintained by: Michael Riffle