YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15229983, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKPYFSLL YSSPTNVKLS NFLIAQQPSG DLKTTPAEEF SPLVEKFNRR LLLGVGSSSV  60
   61 LAIGANFGGT TSFILGLSPG IGRNLKLDVI YPIGGYSRCI DTVEGFEFIY PATWVGDQTL 120
  121 LYRAAEKSER ENSLDLPPAR NSRRKNVNEP VVAFGPPGST GELNVSVIVS PVSPSFS

Type	Start	End	Confidence
Cytoplasmic	1	50	0.75
Transmembrane Helix	51	75	0.71
Non-Cytoplasmic	76	177	0.89