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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149035964, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPLPLLYL CIAAAHLAGA RDATPTEEHT ATVRGLQGRP PDPGQPSPAL EDWEEASEWT  60
   61 SWFNVDHPGG DGDFESLAAI RFYYGPARVC PRPLALEART TDWALPAAIG ERVHANPERG 120
  121 FWCLNREQPR GRRCSNYHVR FRCPLDPPYL PPCSAEAAWG AWGAWGLCSK SCGPGRRLRR 180
  181 RSCQSSSGDT CPGSPQEAQK CVRSRCPAPP KSSLCPCCSH VPLGCSSDTC GCPNHILLGS 240
  241 VVTPSGRPLS GARVSLRTRP GTVATSDTHG TFRVPGVCAG SKANVSARMN GFSTGTAQAH 300
  301 ANTSNSAVVT IVLEELGKPY LVKHPESRVR EAGQNVTFCC KASGTPMPKK YSWFHNGTLL 360
  361 DRRQQGSGPH LELQGLREEQ AGEYHCKAWN EAGTVRSRAA HLTVLAPGQP ACDPRPQEHL 420
  421 IKLPDDCGQP GGGPTYLDVG LCADTRCPGP VGSGPRCGDA GSRCCSVLRL ESRDIRCSGY 480
  481 VLPVKVVAEC GCRKCLPRRG LVRGRVVAAD SGEPLRFARI LLGLAPIGFT SYQGDFTIEV 540
  541 PPATERLVVT FVDSSGEFVD SIRVLPFDPR GAGVYHEIRV LRKAAAVLLD AEQGGEIPLG 600
  601 GTEEAPALGE LVFPPRTFHH PDGRPYSGPV EARVTFVDPR DLASAAAASS DLRYLDSSGE 660
  661 LAPLRTYGMF AVDLHAPGST EQLHVARADV RVDADHVRMP GHADALALWS LDPETGLWEE 720
  721 EGAEQGGGGF RREKEAVRVR REERTFLVGA LTVRERRLFN LDVPERRRCF VKVRAYGTDR 780
  781 FAPSEQVQGV VVTLLNLEPA PGFTANPRAW GRFDSAVTGP NGACVPAFCD AERPDAYTAF 840
  841 VTASLGGEEL EAAPSRPRAT AATVGVAEPY LERLGYQRTD HDDPALKRTG FRLNLARPRT 900
  901 GHESEAHGPV YPWRRLRDCE DAPVTDSHFR FSRVEADKYE YDVVPFHEGA PASWTGDLLA 960
  961 WWPNPQEFRA CFLKVRLQGP QEYMVRSHNA GGTHEDTRGH LYGLRDTRSV RNPERPGASA1020
 1021 ACVEFKCGGM LFDQRQVDRT LVTVTPQGSC RRVAVNTLLQ DYLARHPPLA PADDPATFAM1080
 1081 LAPLDALGHN YGVYTVTDQS PRLAKEIAIG RCFDGSSDGF SREMKADAGT AVTFQCREPP1140
 1141 ARPSLFQRLL ENPASALGDI RREMGQAARD SRVTQTQAGD TGPFGSGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle