YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149031735, gi...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPRRRQAAL SFLTNISLDG RPPLQDHEWG GGEEGGAAKP GARARFSLLA AGCNAFSAPG  60
   61 TAAAPWIAGS GSSPCPLPPS LVPRVLGEPS QPPRSAPAVT GAQLQLPDGP GGAGQEELEE 120
  121 DDAFTNVQVP PASFLGSGTP GSASGSRGRL NSFTQGILPI AFSRQNSQNY CALEQSGQGG 180
  181 STTALEQLQR SRRRLISQRS SLETLEDIEE NAPLRRCRTL SGSPRPKNFK KIHFIKNMRQ 240
  241 HDTRNGRDLK LDGGRQSAGA MSLKEIIGLE GVELGADGKT VSYTQFLSPT NAFGTRRNTI 300
  301 DSTSSFSQFR SLSHRSLSMG RTGSTQGSLD AGNDLGDFID YDPNLLDDPQ WPCGKHKRVL 360
  361 TFPSYMTTVI DYVKPSDLKK DMNETFKEKF PHIKLTLSKI RSLKREMRKL AQEDCGFEEP 420
  421 TVAMAFVYFE KLALRGKLNK QNRKLCAGAC VLLAAKVGSD LKKHEVKHLI DKLEEKFRLN 480
  481 RRELIAFEFP VLVALEFALH LPEHEVMPHY RRLIQSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle