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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP48_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSKTTFLTF LLCIFIFSHF SPSTSKSLTE KPLSFSPSAS LPTLTAERLI KGFNLMPTRD  60
   61 VNVIDEEGSE APRLVERAFD LPAAVDRRGS GGSPSVQDFG HHAGYYKLPN SKAARMFYFF 120
  121 FESRTNKADP VVIWLTGGPG CSSELALFYE NGPFTVSNNS SLSWNEFGWD KASNLIYVDQ 180
  181 PVGTGFSYTS DQSDLRHDED GVSNDLYDFL QAFFKEHPQF VKNDFYITGE SYAGHYIPAL 240
  241 ASRVHRGNKN KEGTHINLKG FAIGNGLTNP EIQYGAYADY ALDMNLITQS DHDNLNRYYA 300
  301 TCQQSIKECS ADGGEGDACA SSYTVCNNIF QKIMDIAGNV NYYDVRKQCE GSLCYDFSNM 360
  361 ENFLNQKSVR KALGVGDIEF VSCSTAVYEA MQMDWMRNLE VGIPALLQDG IKLLVYAGEY 420
  421 DLICNWLGNS KWVHEMEWSG QKEFVAAATV PFHVDNKEAG LMKNYGSLTF LKVHDAGHMV 480
  481 PMDQPKAALQ MLQNWMQGKL STPTGRTAHQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle