YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|212549641, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGPPASSPL PMPLLLLLLL TVGSARAAPL PQTGAGDAPV VEVPSLFVIL SVCSLMVLIV  60
   61 LIANCVSCCK DPEIDFKEFE DNFDDEIDFT PPAEDTPSVQ SPAEVFTLSV PNISLPAPSQ 120
  121 FQSSVEGLKS QVARHSLNYI QEIGNGWFGK VLLGETYTGT SVTRVIVKEL KVSASPKEQD 180
  181 TFLNSGEPYY ILQHPNVLQC VGQCVEAIPY LLVFEFCDLG DLKAYLHNEQ EHVRSESQTM 240
  241 LLQRMACEIA AGLAAMHKLH FLHSDLALRN CYLTSDLNVK VGDYGIGFSR YKEDYIETDD 300
  301 KKIFPLRWTA PELVTSFQDR LLTADQTKYS NIWYEVLQFC WLSPDKRPAA EDVHRLLTYL 360
  361 RMQSQRDSEV DFEQQWTALK PNANSRDPSS SAAFPILDHF ARDRLGREME EVLTVTETSQ 420
  421 GLSFEYVWEA AKHDHFDEQG RGHPDEALSY SSMFFPVEVF ENSLSDPGPG KQDGSGQEGP 480
  481 LRAPGVVPVF DAHNLSVGSD YYIQLEEKSS SSLGLEYPPA LLTTEVDNPE KGGTDAPHLT 540
  541 AFKTLVSEEP SAEEDFFQSS ARPKEANSAE DSHAASIPGS PFNIFSDLDK ADDLPSHQKI 600
  601 FDLMELNGVQ ADFKPAILSP SLDGPKDTCQ SEREKPHDQD PLCFPESPVH QDCFDPLSVQ 660
  661 ELSENFLFLQ EKNLLKGSLP GKGRVNDLQT ELKDAGFISE MLESPRRGSV SSGLELLEHT 720
  721 LDFPSSQENM SGQNKGTGGT PQGATSPQAS PLTEGSPNGP PDSVLKSGET KPFTGVSVPE 780
  781 NSVCLDLSPD PVTGPVEIPA ADAKAPDGGD GPPEVTCQSK EALNPTKRDP ILENEITAQG 840
  841 SMETCLPESG QDLQNQPFSE DPLSGSILEK NSEAVETLNQ LNYKAAPKDA ALASALSSDS 900
  901 TSQDSLLEDS LSTPIPTSEQ SVETPDSLDS VDVHAALLES LGSHTPQKLL PPDKPADSGY 960
  961 ETENLESPEW TLHPAPEGTA DSDTAAAGDS SHSSLPPNPV IVISDAGDGH RGAEGPPQSF1020
 1021 SLGTQSSYRD SAYFSDNDSE PDKKPEEAPG TSASALVLVK DQLPPEPVAP EDSPDDVREG1080
 1081 CLEASQSKPE QSPASALQNS CHSELQETLQ PTPADQSPAS ALQNSCHSEL QETLQPTPAD1140
 1141 QSPASALQNS CHSELQETLQ PTPADQSPAS ALQNSCHSEL QETLQPTPAD QSPASALQNS1200
 1201 CHSELQETLQ PTPAGASRET YPVDDEARGP LGLLNSEFSS CDDLETQEDR PCTLASTGTN1260
 1261 TNELLAYTGS TLDKSLPSHF EGPKLKEPDI EGKYLGKLCV SGMLDLSEDG MDADEEDENS1320
 1321 DDSDEDLRAF NLHSLSSESE DDMEHPVPII VSNDDGRHLR SLLKPSAAAA IEQLPDDWKK1380
 1381 EKKAVTFFDD VTVYLFDQET PTKELGHCGG EAHGPGPSSP AASTGSPYLS RCMNSESSTD1440
 1441 EEGGGFEWDD DFSPDPFMSK TTSLLGSKPS LQTSKYFSPP PPARSSEQSW PHVSPCSRFS1500
 1501 ISPANIASFS LTHLTDSDIE QGGSSEDGDK D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle