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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157819185, gi...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRIIHGET LGLPGLATFG YSLSGKMDVD ENLYPDLLVG SLSDHIVLLR ARPVINILHR  60
   61 TLVARPAVLD PSLCTVTSCV QVELCFAYNQ SAGNPNYRRN ITLAYTVEAD RDRRPPRLRF 120
  121 ARSQSSVFHG FFSMPETHCQ TLELLLMDNV RDKLRPIVIT MNYSLPLRMP DRLKLGLRSL 180
  181 DAYPVLNQAQ AMENHTEVHF QKECGPDNKC DSNLQMRAAF VSEQLQPLSR LQYSRDTKKL 240
  241 FLSINVTNSP SRQRAGEDAH EALLTLEVSS ALLLSSVRPA GTCQANETNT VCELGNPFKR 300
  301 NQRMELLIAF EVTGVTLHTR DLRAHLQLST SSHQDNLQPM FLTLQVDYTL QASLSLMNHR 360
  361 LQSFFSGTVM GEAAMKTVKD VGSPLKYEFQ VSPVGDGLAA LGTLVLGLEW PYEVTNGKWL 420
  421 LYPTEITIHS NGSWPCQPHG NLVNPLNLTL SDPGVKPLSP QRRRRQLDPG GDQGPPPVTL 480
  481 AAAKKAKSET VLTCSNGRAR CVWLECPLPD ASNITNVTVK ARVWNSTFIE DYKDFDRVRV 540
  541 DGWATLFLRT SIPTINMENK TTWFSVDIDS ELVEELPAEI ELWLVLVAVG AGLLLLGLII 600
  601 ILLWKCGFFK RARTRALYEA KRQKAEMRSQ PSETERLTDD Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle