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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2583120, gi|2...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSPLTLFLI LFFFFLSSAL SSSSSELDIL LDIKSSLDPE KRFLTSWTPD ADPCSSGSFD  60
   61 GVACDGNRRV ANISLQGMGL TGTIPPSIGL LTSLTGLYLH FNSLTGHIPK DISNLPLLTD 120
  121 LYLNVNNLSG EIPPLIGNLD NLQVIQLCYN KLSGSIPTQF GSLKKITVLA LQYNQLSGAI 180
  181 PASLGDIDTL TRLDLSFNNL FGPVPVKLAG APLLEVLDIR NNSFSGFVPS ALKRLNNGFQ 240
  241 YSNNHGLCGD GFTDLKACTG LNGPNPNRPD PTNPTNFTTV DVKPESADLQ RSNCSNNNGG 300
  301 CSSKSLKSSP LGIVMGLIGS ILAVAIFGGS TFTWYRRRKQ KIGSSLDAMD GRISTEYNFK 360
  361 EVSRRKSSSP LISLEYASGW DPLGRGQSSN NNSALSQEVF ESFMFNLEEI ERATQSFSEI 420
  421 NLLGKSNVSS VYKGILRDGS VAAIKCIAKS SCKSDESEFL KGLKMLTLLK HENLARLRGF 480
  481 CCSKGRGECF LIYEFVPNGN LLQYLDVKDE TGEVLEWATR VSIINGIARG IVYLHGENGN 540
  541 KPAIVHQNLS AEKILIDHWY NPSLADSGLH KLFTDDIVFS KLKASAAMGY LAPEYITTGR 600
  601 FTDKSDVYAF GMILLQILSG KSKISHLMIL QAVESGRLNE DFMDPNLRKN FPEVEAAQLA 660
  661 RLGLLCTHES SNQRPSMEDV IQELNNLAAD Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle