YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149052373, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQEQYSHHR STMPSSEGPH IYKVGIYGWR KRCLYFFVLL LMILILVNLA MTIWILKVMN  60
   61 FTIGNALYFK SARNVTVNIL NDQTKVLTQL VTGPKAVEAY GKRFEVKTVS GKLLFSADDS 120
  121 EVVVGAERLR VLGAEGTVFP KSIETPNVRA DPFKELRLES PTRSLVMEAP KGVEINAEAG 180
  181 NMEATCRSEL RLESKDGEIK LDAAKIKLPR LPRGSYTPTG TRQKVFEVCV CANGRLFLSQ 240
  241 AGTGSTCQIN TSVCL

Type	Start	End	Confidence
Cytoplasmic	1	32	0.94
Transmembrane Helix	33	55	0.94
Non-Cytoplasmic	56	255	0.94