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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19423948, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSIKLVLLV LLIISFHSQT VSKHHPTIDG LLDRLDSLLP TSSVQESAAK GLLQRLLPTH  60
   61 SQSFELRIIS KDACGGTSCF VIENYDGPGR IGPEILIKGT TGVEIASGLH WYLKYKCNAH 120
  121 VSWDKTGGIQ VASVPQPGHL PRIDSKRIFI RRPVPWNYYQ NVVTSSYSYV WWGWERWERE 180
  181 IDWMALQGIN LPLAFTGQEA IWQKVFKRFN ISKEDLDDYF GGPAFLAWAR MGNLHAWGGP 240
  241 LSKNWLDDQL LLQKQILSRM LKFGMTPVLP SFSGNVPSAL RKIYPEANIT RLDNWNTVDG 300
  301 DSRWCCTYLL NPSDPLFIEI GEAFIKQQTE EYGEITNIYN CDTFNENTPP TSEPEYISSL 360
  361 GAAVYKAMSK GNKNAVWLMQ GWLFSSDSKF WKPPQLKALL HSVPFGKMIV LDLYAEVKPI 420
  421 WNKSAQFYGT PYIWCMLHNF GGNIEMYGAL DSISSGPVDA RVSKNSTMVG VGMCMEGIEQ 480
  481 NPVVYELTSE MAFRDEKVDV QKWLKSYARR RYMKENHQIE AAWEILYHTV YNCTDGIADH 540
  541 NTDFIVKLPD WDPSSSVQDD LKQKDSYMIS TGPYETKRRV LFQDKTADLP KAHLWYSTKE 600
  601 VIQALKLFLE AGDDLSRSLT YRYDMVDLTR QVLSKLANQV YTEAVTAFVK KDIGSLGQLS 660
  661 EKFLELIKDM DVLLASDDNC LLGTWLESAK KLAKNGDERK QYEWNARTQV TMWYDSNDVN 720
  721 QSKLHDYANK FWSGLLEDYY LPRARLYFNE MLKSLRDKKI FKVEKWRREW IMMSHKWQQS 780
  781 SSEVYPVKAK GDALAISRHL LSKYFP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle