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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149068918
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVAAAAAA AVAAMAPPGC PGSCPNFAVV CSFLERYGPL LDLPELPFPE LERVLQAPPP  60
   61 DIGHGEVPKE LVELHLKLMR KIGKSVTADR WEKYLIKICQ EFNSTWAWEM EKKGYLEMSV 120
  121 ECKLALLKYL CECQFDDNLK FKNIINEEDA DTMRLQPIGR DKDGLMYWYQ LDQDHNVRMY 180
  181 IEEQDDQDGS SWKCIVRNRN ELAETLALLR AQIDPVLLKN SSQQEDPSRE SPTLEDEETK 240
  241 KDEETPKQAV KIEKADEKEL VKLPVIVKLE KPVPETEDKK IIREESDSFK ENVKPIKVEA 300
  301 KECRVDPKDL KGSLERLGSQ EPERADFGSN IKSSQDITEK STEETEKLKN DQQAKIPLKK 360
  361 REIKLSDDFD SPVKGHLCKS ATPTKECLKD DVKQEEETCK RVSTISALSH EGKQLMNGEM 420
  421 NDDKVTASLK TEQLETQLCH TKEDSSSIPA KDGSAGLEGS GVECLNSVLT STKTSELEKE 480
  481 VSLGKAVDGS ASDVESHSQK GRGEEPGPPN MDMPLEPSEK TTDLSLKSTL SATESCPTKI 540
  541 EEKAPKSKGE NHTAGIECLE KVEKAKKTSV DKDIQRLSPI PEEVVRGPLE SEESGLCEVA 600
  601 ETPLPLEMTG AKEKQTSEKK GVDCLSRGSS EGQSLENASP DILRENSESS RVEMAKLDNA 660
  661 QTSGVEDTSQ TKGSVQKNKC KYKLVSEGNS TASENTEITS ERKKEGIKLT IRISSRKKKP 720
  721 DCPPQIVDSE SKEEKAGKEE EKTSVGRTLR RSPRISRPTA KVAEIRDQKA DKKRAEGEEG 780
  781 VEGETTSLQT ADKKEHLKKA EKDTNSKASK VKPKGKVRWT GSRTRGRWKY SSNDESEGSE 840
  841 SDKSSAASEE EEGKESEEAV LPDDDEPCKK CGLPNHPELI LLCDSCDSGY HTACLRPPLM 900
  901 IIPDGEWFCP PCQHKLLCEK LEEQLQDLDV ALKKKERAER RKERLVYVGI SIENIIPPQE 960
  961 PEFSEDQEEK KKDAKKSKAN VLERRSTRTR KCISYRFDEF DEAIDEAIED DIKEADGGGV1020
 1021 GRGKDISTIT GHRGKDISTI LDEERKENKR PQRAAAARRK KRRRLNDLDS DSNLDEEESE1080
 1081 DEFKISDGSQ DEFVVSDENP DESEEEPPSN EDSDTDFCSR RLRRHPSRPM RQSRRLRRKT1140
 1141 QKKKYSDDDE EEEEEEEESE ENSRDSESDF SDDFSDEFVE TRRRRSRRNQ KRQINYKEDS1200
 1201 ESDGSQKSLR RGKEIRRVHK RRLSSSESEE SYMSKNSEDD ELTKESKRSI RKRGRSTGEY1260
 1261 SEADEEEEEE GKPSRKRLHR IETDEESCDS AHGDADQPAR ESQASVLPSE QESSKKPYRI1320
 1321 ESDEEEDFEN VGKVGSPLDY SLVDLPSTNG QSPGKAIENL MGKATEKSQT PKDNGTASAN1380
 1381 LAPNGTSGGQ EVGAPEEDED ELLRVTDLVD YVCNSEQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle