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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6714300, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIFFFFISF VVFSVADLPS CFSADQQYEE CRSRNLTCGS GHRVFESTTY PFWGGFNKPK  60
   61 FCGHSSFKLS CEGDQNLTLA IGNITLRVVS ANLEDHKISV ADDSLLDGGC LNIWNFNGKN 120
  121 QFTLDSNTET IDVFVNCSGV APLQISCEES YEDPVTYHVL RSSDSDEGCM KYAEIPMLRS 180
  181 AKDELQRSEL TFVEALRKGF DLRYIMEDKA CRRCIDSGGI CGSALDSESF RCLCADRPHN 240
  241 SSCDDNTNQA TQTLSLDPKF KACEPKSCGK GPQISYPFYL SGKQESFCGY PSFELTCDDE 300
  301 EKLPVLGISG EEYVIKNISY LTQSFQVVNS KASHDPCPRP LNNLTLHRTP FFVNPSHINF 360
  361 TILYNCSDHL LEDFRTYPLT CARNTSLLRS FGVFDRKKLG KEKQIASMSC QKLVDVPVLA 420
  421 SNESDVMGMT YVEILKRGFV LNWTANSCFR CITSGGRCGT DQQEFVCLCP DGPKLHDTCT 480
  481 NGKNDKRRRV IVKVLIGLIA ASIFWYVYHR RKTKSYRNSS ALLPRNISSD PSAKSFDIEK 540
  541 AEELLVGVHI FSYEELEEAT NNFDPSKELG DGGFGTVYYG KLKDGRSVAV KRLYDNNFKR 600
  601 AEQFRNEVEI LTGLRHPNLV ALFGCSSKQS RDLLLVYEYV ANGTLADHLH GPQANPSSLP 660
  661 WSIRLKIAVE TASALKYLHA SKIIHRDVKS NNILLDQNFN VKVADFGLSR LFPMDKTHVS 720
  721 TAPQGTPGYV DPDYHLCYQL SNKSDVYSFA VVLMELISSL PAVDITRPRQ EINLSNMAVV 780
  781 KIQNHELRDM VDPSLGFDTD TRVRQTVIAV AELAFQCLQS DKDLRPCMSH VQDTLTRIQN 840
  841 NGFGSEMDVV DVNKSGPLVA QSPDSVIVKW DKRDRNIQNF VIGPDRTKSA ILYCYLLPTE 900
  901 TIFLLVTIAM DIYSSITQAA DLNNNNSNLH FQTFHPSSTS LESLFLHHHQ QQLLHFPGNS 960
  961 PDSSNNFSST SSFLHSDHNI VDETKKRKAL LPTLSSSETS GVSDNTNVIA TETGSLRRGK1020
 1021 RLKKKKEEED EKEREVVHVR ARRGQATDSH SLAERVRRGK INERLRCLQD MVPGCYKAMG1080
 1081 MATMLDEIIN YVQSLQNQVE FLSMKLTAAS SFYDFNSETD AVDSMQRAKA RETVEMGRQT1140
 1141 RDGSPVFHLS TWSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle