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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9502168, gi|7...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKPLNNIW IRRQQCPCGD WKCYIRLEED ESTITKSEIE STPTPTSQYD TVFTPYVGQI  60
   61 FTTDDEAFEY YSTFARKSGF SIRKARSTES QNLGVYRRDF VCYRSGFNQP RKKANVEHPR 120
  121 ERKSVRCGCD GKLYLTKEVV DGVSHWYVSQ FSNVHNHELL EDDQVRLLPA YRKIQQSDQE 180
  181 RILLLSKAGF PVNRIVKLLE LEKGVVSGQL PFIEKDVRNF VRACKKSVQE NDAFMTEKRE 240
  241 SDTLELLECC KGLAERDMDF VYDCTSDENQ KVENIAWAYG DSVRGYSLFG DVVVFDTSYR 300
  301 SVPYGLLLGV FFGIDNNGKA MLLGCVLLQD ESCRSFTWAL QVCCIRFIVI VMIGTFVRFM 360
  361 RGRHPQTILT DIDTGLKDAI GREMPNTNHV VFMSHIVSKL ASWFSQTLGS HYEEFRAGFD 420
  421 MLCRAGNVDE FEQQWDLLVT RFGLVPDRHA ALLYSCRASW LPCCIREHFV AQTMTSEFNL 480
  481 SIDSFLKRVV DGATCMQLLL EEVSAAASLA KQILPRFTYP SLKTCMPMED HARGILTPYA 540
  541 FSVLQNEMVL SVQYAVAEMA NGPFIVHHYK KMEGECCVIW NPENEEIQCS CKEFEHSGIL 600
  601 CRHTLRVLTV KNCFHIPEQY FLLRWRQESP HVATENQNGQ GIGDDSAQTF HSLTETLLTE 660
  661 SMISKDRLDY ANQELSLLID RVRNTAPANC LYQP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle