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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25407778, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWIRRETIG HGSFSTVSLA TTSGSSSKAF PSLMAVKSSG VVCSAALRNE RDVLDDLGDC  60
   61 SEIVRCFGEG RTVENGEEIY NLFLEYASGG SLADRIKSSG EALPEFEVRR FTRSIVKGLC 120
  121 HIHGNGFTHC DIKLENVLVF GDGDVKISDF GLAKRRSGEV CVEIRGTPLY MAPESVNHGE 180
  181 FESPADIWAL GCSVVEMSSG KTAWCLEDGV MNNVMSLLVR IGSGDEVPRI PVELSEEGKD 240
  241 FVSKCFVKNA AERWTAEMLL DHPFLAVDDE SGEEDEACSV SPRNPFDFPG WNSVQSPVND 300
  301 SVMFGSLVGS PEERISGLVS EKVPDWSVSC DWVNVSLEMG ETCSSTSECD AGLSCQSCPA 360
  361 NGNTGSTCTR IQPLNPTSKV NGLPFNKYSW LTTHNSYAIT GANSATGSFL VSPKNQEDSI 420
  421 TNQLKNGVRG IMLDTYDFQN DIWLCHSTGG TCFNFTAFQP AINALKEIND FLESNLSEIV 480
  481 TIILEDYVKS QMGLTNVFNA SGLSKFLLPI SRMPKDGTDW PTVDDMVKQN QRLVVFTSKK 540
  541 DKEASEGLAY QWNYMVENQY GNDGMKDGSC SSRSESSSLD TMSRSLVFQN YFETSPNSTQ 600
  601 ACADNSSPLI EMMRTCHEAA GKRWPNFIAV DFYQRSDSGG AAEAVDEANG RLTCGCDSLV 660
  661 YCKSNAPFGT CDAPPPKSSP SPVSGGRILH GNQEIFLRVM LILQLLDCHL SEISGKADTM 720
  721 VIHTHSTNQT THICKFSMQF TDRSFVEPEE VDEVIQLGAD TNLQSKQLGF SQKQKALNTN 780
  781 RLSVSKQIFS GVLLDYYTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle