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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2924778, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRVLLILC VPSLFFFLAA STKEYPGQPK IFDVRNYGAR ADSQRDNAFA FTKAWNEACQ  60
   61 WSYGRSTVYI PSGIFYLRQV TFSGPCKSSI TFFIRGTLLA PRNPYAINQE EWILFKYVDN 120
  121 LTVTGGGLLD GQGSYSWPLN DCNKNTNCRT LAMNIGFAFV KSSKINGLRS INSKMGHFNL 180
  181 FSVEDFNITG VTITAPGDSP NTDGIKIGKS SHMQIYNVTI GTGDDCIAIL DGTSNLDISD 240
  241 VRCGPGHGIS VGSLGRYKEE KNVQGLTVRN SIINGTTDGL RIKTWAKSVS QISVSNFLYE 300
  301 NIQMINVGNP IVIDQQYCPH GQCDSPGKYA SHVQIKDVKY NNIWGTSTSK EALKMQCSKT 360
  361 FPCQDVELSN INLHYVGRDG LVTALCENVG GSIRGKIVPA NCRINLFLPS NIITDSNSTL 420
  421 EDKMQGIFQL ANTTQTQRFH QLPLWILWRL WNSRNILYFQ RRHVPWETTL QLAQMDLQEW 480
  481 NEAVTPSHIN SHGTTIRSHI PNWRRPTNGW VKCNVDGSFI NGNIPGKGGW IVRDHNGRYE 540
  541 FAGQAIGNCI DNALECEFQA LLMAMQHCWS KGYRRICFEG DNKEMFDLIN GLKMHFGAFN 600
  601 WIRDILWWAS KFEQTQFQWT NRQNNKPADI LARTPLQHQF LFANHFWVPR VISFALHCDY 660
  661 TSSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle