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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PP224_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEASCLASP LLYTNSGIHS DSFYASLIDS ATHKAQLKQI HARLLVLGLQ FSGFLITKLI  60
   61 HASSSFGDIT FARQVFDDLP RPQIFPWNAI IRGYSRNNHF QDALLMYSNM QLARVSPDSF 120
  121 TFPHLLKACS GLSHLQMGRF VHAQVFRLGF DADVFVQNGL IALYAKCRRL GSARTVFEGL 180
  181 PLPERTIVSW TAIVSAYAQN GEPMEALEIF SQMRKMDVKP DWVALVSVLN AFTCLQDLKQ 240
  241 GRSIHASVVK MGLEIEPDLL ISLNTMYAKC GQVATAKILF DKMKSPNLIL WNAMISGYAK 300
  301 NGYAREAIDM FHEMINKDVR PDTISITSAI SACAQVGSLE QARSMYEYVG RSDYRDDVFI 360
  361 SSALIDMFAK CGSVEGARLV FDRTLDRDVV VWSAMIVGYG LHGRAREAIS LYRAMERGGV 420
  421 HPNDVTFLGL LMACNHSGMV REGWWFFNRM ADHKINPQQQ HYACVIDLLG RAGHLDQAYE 480
  481 VIKCMPVQPG VTVWGALLSA CKKHRHVELG EYAAQQLFSI DPSNTGHYVQ LSNLYAAARL 540
  541 WDRVAEVRVR MKEKGLNKDV GCSWVEVRGR LEAFRVGDKS HPRYEEIERQ VEWIESRLKE 600
  601 GGFVANKDAS LHDLNDEEAE ETLCSHSERI AIAYGLISTP QGTPLRITKN LRACVNCHAA 660
  661 TKLISKLVDR EIVVRDTNRF HHFKDGVCSC GDYW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle