YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25405682, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRLVLIIFF VYTIILSIGS INCIDNNNLV TNQAALFVFG DSLFDAGNNN YINTVSSFRS  60
   61 NIWPYGQTNF KFPTGRLSDG RLIPDFIVNI TKLLCFECLT FFYSLIADLE AEKAWLPSIP 120
  121 PNLQPNNGNN QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET 180
  181 KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE EVYKMGGRKF 240
  241 GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD 300
  301 YHTSLSERIN SPSKYGFKEG KKACCGSGPL RGINTCGNRI GPSQGYGLCE NVTDYLFYDS 360
  361 SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT

Type	Start	End	Confidence
Signal Peptide	1	23	0.68
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	397	0.93