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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SRF7_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTENRVVLAL LILCIVGFEP SFIHGATDSS DTSALNIMFS SMNSPGQLSQ WTASGGDPCG  60
   61 QNWKGITCSG SRVTQIKLPS LGLSGSLGFM LDKLTSVTEF DMSNNNLGGD LPYQLPPNLE 120
  121 RLNLANNQFT GSAQYSISMM APLKYLNLAH NQLKQLAIDF TKLTSLSILD LSSNAFIGSL 180
  181 PNTCSSLTSA KSIYLQNNQF SGTIDILATL PLENLNIANN RFTGWIPDSL KGINLQKDGN 240
  241 LLNSGPAPPP PPGTPPISKS SPTPKSGNRG NRSNGDSSNS KDSSKSGLGA GGVAGIVISL 300
  301 IVVTAVIAFF LIKRKRSKRS SSTDIEKTDN NINQPIILAS NDFHQENKSV QNPPLVETKK 360
  361 LDTSLSMNLR PPPSERHKSF DDDDSTMRKP IVAKKAAVVV PSNVNTYTVS DLQVATNSFS 420
  421 VDNLLGEGTF GRVYRAQFED GKVLAVKKID SSALPTDTAD DFTEIVSKIA HLDHENVTKL 480
  481 DGYCSEHGQH LVVYEFHRNG SLHDFLHLAE EESKPLIWNP RVKIALGTAR ALEYLHEVCS 540
  541 PSIVHKNIKS ANILLDSELN PHLSDSGLAS FLPTANELLN QNDEGYSAPE TSMSGQYSLK 600
  601 SDVYSFGVVM LELLTGRKPF DSTRSRSEQS LVRWATPQLH DIDALGKMVD PALKGLYPVK 660
  661 SLSRFADVIA LCVQPEPEFR PPMSEVVQAL VVLVQRANMS KRTVGVGSGS SGVNDYM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle